ItikBanksTumor¶
Systems / ODEs / Chemical & biological systems
A Lotka–Volterra-type cancer model of competing tumour, healthy, and immune cell populations whose interactions produce a strange attractor.
Definition¶
\[
\begin{aligned}
\dot{y_{0}} &= - a_{12} y_{0} y_{1} - a_{13} y_{0} y_{2} + y_{0} \left(1 - y_{0}\right) \\
\dot{y_{1}} &= - a_{21} y_{0} y_{1} + r_{2} y_{1} \left(1 - y_{1}\right) \\
\dot{y_{2}} &= - a_{31} y_{0} y_{2} - d_{3} y_{2} + \frac{r_{3} y_{0} y_{2}}{k_{3} + y_{0}}
\end{aligned}
\]
Parameters¶
| Symbol | Default | Role |
|---|---|---|
a12 |
1 |
competition of healthy cells on the tumour |
a13 |
2.5 |
competition of immune cells on the tumour |
a21 |
1.5 |
competition of the tumour on healthy cells |
a31 |
0.2 |
inactivation rate of immune cells by the tumour |
d3 |
0.5 |
death rate of effector immune cells |
k3 |
1 |
half-saturation of the immune response |
r2 |
0.6 |
growth rate of healthy host cells |
r3 |
4.5 |
maximum immune recruitment rate |
Properties¶
Lyapunov spectrum
$+0.001739,\; -0.4975,\; -0.6006$
computed at build
computed at build
Kaplan–Yorke dimension
$D_{KY} = 1.003$
Divergence ∇·f
$\nabla\!\cdot f = - a_{12} y_{1} - a_{13} y_{2} - a_{21} y_{0} - a_{31} y_{0} - d_{3} - 2 r_{2} y_{1} + r_{2} + \frac{r_{3} y_{0}}{k_{3} + y_{0}} - 2 y_{0} + 1$
state-dependent
state-dependent
Equilibria
7 equilibria
2 stable · 5 unstable
2 stable · 5 unstable
Define it in TSDynamics¶
import tsdynamics as ts
sys = ts.systems.ItikBanksTumor()
traj = sys.integrate(final_time=100.0, dt=0.01)
exps = sys.lyapunov_spectrum()
ts.kaplan_yorke_dimension(exps)
Reference¶
Itik & Banks (2010), Int. J. Bifurcation Chaos 20, 71-79